Index

B

BaseStrategy (class in goldilocks.strategies), [1]

C

candidates (goldilocks.goldilocks.Goldilocks attribute), [1]

census() (goldilocks.goldilocks.Goldilocks method), [1] (goldilocks.strategies.BaseStrategy method), [1] (goldilocks.strategies.GCRatioStrategy method), [1] (goldilocks.strategies.MotifCounterStrategy method), [1] (goldilocks.strategies.NucleotideCounterStrategy method), [1] (goldilocks.strategies.PositionCounterStrategy method), [1] (goldilocks.strategies.ReferenceConsensusStrategy method), [1]

E

export_fasta() (goldilocks.goldilocks.Goldilocks method), [1]

export_meta() (goldilocks.goldilocks.Goldilocks method), [1]

G

GCRatioStrategy (class in goldilocks.strategies), [1] Goldilocks (class in goldilocks.goldilocks), [1] goldilocks (module), [1] goldilocks.cmd (module), [1]

goldilocks.goldilocks (module), [1] goldilocks.strategies (module), [1] goldilocks.util (module)

M

main() (in module goldilocks.cmd), [1]

MotifCounterStrategy (class in goldilocks.strategies), [1]

N

NucleotideCounterStrategy (class in goldilocks.strategies), [1]

P

parse_si_bp() (in module goldilocks.util) plot() (goldilocks.goldilocks.Goldilocks method), [1]

PositionCounterStrategy (class in goldilocks.strategies), [1]

Q

query() (goldilocks.goldilocks.Goldilocks method), [1]

R

ReferenceConsensusStrategy (class in goldilocks.strategies), [1]

reset_candidates() (goldilocks.goldilocks.Goldilocks method), [1]